miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|169670668|gb|FE597789.1|FE597789 AACATTAACAGATTTCACTTCTCACTTCGTACAGAGAGAACATTATCAGGAACCACCAGCACCTAACTACACCATCCTAC
CAGCCAAACCGAGCAAACTAGCATCACTACCAGGAGCCTTACGCCAACAAAGAGCAGAGGGGAAAGCCTAGCATCTAAGA
CGAGGTGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCG
AGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCG
AAGATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCAC
CTTGAAGATGTAGATCTTGTACGTCTCCACCGACTTCTTGGCCTTCTTCTTCCCCTTCTTGCCCTCGCCGCCCTCCTTGC
CGGCGGACTTGCCCGCGGGGAGCCGCTTCTCGGCCTTGGGCTTCTTCCCCGCCGGGGCCTTCTCCGCCTTCTCCGTCGCG
GGCTCCTCCTCCGCGGGCTTCTTCGCCGCCGGCTTCTTCTCCGCCTTGGGGGCCATCGACGCGGCTGCTGGGGGGGTTCT
GCGGCTGGGATTCGGGTTGGTTGGGGAAGAGGAGGCTGCGAAGTCACT




Most similar to sp|Q6ZBP3|H2B2_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6ZBP3|H2B2_ORYSJ Histone H2B.2 OS=Oryza sativa subsp. japonica
           GN=H2B.2 PE=3 SV=1
          Length = 150

 Score =  176 bits (447), Expect = 1e-43
 Identities = 91/91 (100%), Positives = 91/91 (100%)
 Frame = -1

Query: 430 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 251
           VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE
Sbjct: 60  VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 119

Query: 250 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 158
           IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 IQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150